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terça-feira, 19 de março de 2019

Reconstrução ancestral dos trilobitas

10 de janeiro de 2019

Peter Moon  |  Agência FAPESP – O registro fóssil mostra que os trilobitas surgiram há 521 milhões de anos nos oceanos do período Cambriano, quando os continentes ainda eram uma paisagem inóspita à maioria das formas de vida. 


Reconstrução ancestral dos trilobitas Pesquisadores da Unesp e da USP usam análise biogeográfica para estudar artrópodes extintos há mais de 252 milhões de anos. Trabalho foi publicado na Scientific Reports (imagem: espécime fossilizado completo do trilobita devoniano Metacryphaeus caffer/ Dlloyd)

Poucos grupos de animais tiveram tamanho sucesso adaptativo como os trilobitas, artrópodes que caminharam pelo solo marinho por 270 milhões de anos até a grande extinção do Permiano, há 252 milhões de anos. Quanto mais recuado no tempo viveu um determinado grupo de animais, mais escassos e raros são seus fósseis, mais difícil é a compreensão sobre o seu modo de vida e mais complicado é para os paleontólogos conseguirem estabelecer relações evolutivas no tempo e no espaço.

Superando as dificuldades inerentes à investigação de animais que viveram há tanto tempo, um grupo de cientistas da Faculdade de Ciências da Universidade Estadual Paulista (Unesp), em Bauru, e da Universidade de São Paulo (USP) obteve sucesso ao conseguir, pela primeira vez, inferir padrões paleobiogeográficos entre os trilobitas. A paleobiogeografia é o ramo da paleontologia que estuda a distribuição de plantas e animais extintos e sua relação com características geográficas antigas.
O trabalho foi desenvolvido por Fábio Augusto Carbonaro, pós-doutorando no laboratório coordenado pelo professor Renato Pirani Ghilardi. Participaram também os professores Max Cardoso Langer, da Faculdade de Filosofia, Ciências e Letras de Ribeirão Preto, e Silvio Shigueo Nihei, do Instituto de Biociências, ambas instituições da USP, entre outros.
A pesquisa foi feita a partir da análise das diferenças e semelhanças morfológicas entre trilobitas do gênero Metacryphaeus, com 11 espécies descritas. Esses viveram no período Devoniano, entre 416 milhões e 359 milhões de anos atrás, e habitaram as águas frias onde hoje ficam a Bolívia, o Peru, o Brasil, as ilhas Malvinas e a África do Sul. 

Mais especificamente, o gênero Metacryphaeus existiu durante os estágios Lochkoviano e Pragiano. O período Devoniano é subdividido em sete estágios. Os dois mais antigos são o Lochkoviano (419,2 milhões até 410,8 milhões de anos) e o Pragiano (410,8 milhões até 407,6 milhões de anos).
Resultados da pesquisa foram publicados na Scientific Reports, do grupo Nature, e fazem parte do projeto "Paleobiogeografia e rotas migratórias de paleoinvertebrados devonianos do Brasil", que tem apoio da FAPESP e do CNPq e é coordenado por Ghilardi. 
“Ao desaparecerem na extinção do Permiano, há 252 milhões de anos, os trilobitas não deixaram descendentes. Seus parentes vivos mais próximos são os camarões e, de forma bem mais distanciada, as aranhas, os escorpiões, as aranhas-do-mar e também os ácaros”, disse Ghilardi. 
O pesquisador explica que fósseis de trilobitas são abundantes e encontrados em todo o mundo. São tão abundantes que acabaram apelidados de baratas do mar. A comparação não é descabida, dado que anatomicamente os trilobitas assemelhavam-se de fato às baratas. A diferença é que não eram insetos e possuíam o corpo articulado, dividido em três partes (ou lobos), daí seu nome.
No hemisfério Norte, o registro de trilobitas é muito rico. Os paleontólogos já descreveram 10 ordens, abarcando mais de 17 mil espécies distintas. As menores tinham apenas 1,5 milímetro, enquanto as maiores espécies atingiam até 70 centímetros de comprimento (40 cm de largura). Há regiões como o Marrocos, por exemplo, onde os trilobitas são preservados com perfeição e requinte, quase como se fossem belos camafeus de priscas eras.

Já no Brasil, no Peru e na Bolívia seus fósseis apresentam um estado de conservação muitas vezes sofrível, limitando-se às impressões que seus exoesqueletos deixaram no lodo do solo marinho. 
“Muito embora seu estado de conservação não seja o ideal, há milhares de registros de trilobitas nos sedimentos que formam a Bacia Paraná, na região Sul, e a Bacia Parnaíba, fincada entre as regiões Norte e Nordeste”, disse Ghilardi, que é também presidente da Sociedade Brasileira de Paleontologia.
Segundo ele, tal estado de conservação pode ser uma decorrência das condições geológicas e climáticas aqui reinantes durante a era Paleozoica, quando as porções de terra firme que um dia formariam a América do Sul encontravam-se no Polo Sul – e em muitos momentos inteiramente cobertas de gelo.

Durante o período Devoniano, a América do Sul e a África encontravam-se unidas dentro do supercontinente Gondwana, sendo que o atual território da África do Sul situava-se colado ao Uruguai e à Argentina na altura do Rio da Prata, e os estados do sul do Brasil eram unidos aos territórios das atuais Namíbia e Angola.

Análise parcimoniosa

O trabalho de pesquisa iniciou com a análise de 48 caracteres (as medidas de diversos órgãos anatômicos) encontrados nos fósseis de cerca de 50 espécimes das 11 espécies do gênero Metacryphaeus. 
“Tais caracteres servem, em princípio, para estabelecer a filogenia, ou seja, as relações evolutivas mais próximas ou mais distantes entre todas as espécies do universo de análise”, disse Ghilardi. 
É a chamada análise parcimoniosa, muito usada para estabelecer relações entre seres vivos dentro de um determinado ecossistema, e que nos últimos anos começa a ser empregada igualmente no estudo de fósseis.
Ghilardi comenta que, em geral, a parcimônia é o princípio de que a explicação mais simples que pode interpretar os dados deve ser a escolhida. Na análise da filogenia, a parcimônia significa que uma hipótese de relacionamentos que requer o menor número de mudanças de caracteres entre as espécies analisadas (como no caso dos trilobitas do gênero Metacryphaeus) é a mais provável de estar correta.
Nihei, do IB-USP, é taxonomista e sistemata – que trata de sistemas de classificação – de insetos. Na pesquisa, sua colaboração foi na biogeografia. 
“Métodos de análise biogeográfica são empregados normalmente com grupos viventes, cujas estimativas de idade são fornecidas por filogenias moleculares, ou seja, pelo chamado relógio molecular, que indica a idade provável da divergência entre os ancestrais de uma ou mais espécies. Nesse trabalho com trilobitas, usamos idades da mesma forma, porém fornecidas pelos registros fósseis”, disse. 

"O principal ponto do trabalho é o uso dos fósseis em um método que usualmente é utilizado para biogeografias moleculares. Há pouquíssimos casos como o nosso, com fósseis. Creio que nosso estudo abre um novo horizonte para os métodos biogeográficos que requerem um cronograma [um cladograma datado molecularmente], pois esse cronograma pode ser também obtido a partir de táxons exclusivamente fósseis, como os estudados pelos paleontólogos, e não somente cladogramas moleculares de animais viventes”, disse Nihei. 
Langer destaca que o aspecto mais importante do trabalho, “e foi por isso que ele foi aceito por uma revista tão importante como a Scientific Reports, é que pela primeira vez se usa análise parcimoniosa para entender a filogenia de um gênero de trilobitas no hemisfério Sul”. 

Dispersão gonduânica

Os resultados das análises paleobiogeográficas reforçaram a ideia de que a Bolívia e o Peru formam o lar ancestral dos Metacryphaeus, algo que já era aventado como hipótese. 

"Os modelos estimam uma probabilidade de 100% para a Bolívia e o Peru serem a área ancestral do clado Metacryphaeus, assim como para a maioria de seus clados internos”, disse Ghilardi.
A confirmação da hipótese mostra como os modelos parcimônicos têm o poder de sugerir a presença de clados em um determinado momento do passado do qual não se conhecem registros físicos da presença dos mesmos. 
No caso de Metacryphaeus, seus registros mais antigos na Bolívia e Peru são do início do Pragiano (410,8 milhões até 407,6 milhões de anos), mas estima-se que o gênero tenha evoluído naquela região no estágio Lochkoviano (419,2 milhões até 410,8 milhões de anos).

Em outras palavras, os modelos parcimônicos sugerem que o gênero Metacryphaeus deve ter se originado na Bolívia e Peru em algum momento antes de 410,8 milhões de anos atrás, porém não anterior a 419,2 milhões de anos – idades muito mais antigas do que aquelas dos fósseis hoje conhecidos.

Segundo Ghilardi, a interpretação dos resultados sugere que a radiação do gênero Metacryphaeus para outras áreas do supercontinente da Gondwana ocidental ocorreu durante episódios transgressivos marinhos nos estágios Lochkoviano e Pragiano, quando o mar inundou porções do antigo supercontinente Gondwana.

“A dispersão dos trilobitas do gênero Metacryphaeus durante o estágio Lochkoviano ocorreu da Bolívia e do Peru para o Brasil – para as bacias sedimentares do Paraná, hoje no sul do País, e do Parnaíba, entre as regiões Norte e Nordeste – e em direção das ilhas Malvinas, enquanto a dispersão durante o estágio seguinte, o Pragiano, se deu na direção da África do Sul”, disse. 

Os fósseis de trilobitas da Bacia Paraná vêm sendo continuamente encontrados nas últimas décadas. Já os fósseis da Bacia do Parnaíba foram coletados no fim do século 19 e estavam depositados no Museu Nacional, destruído pelo incêndio em setembro. 

"Esses fósseis ainda não foram localizados sob os escombros do edifício, mas tudo leva a crer que não existem mais. Supõe-se que impressões das carapaças no antigo lodo do solo oceânico, mesmo que petrificadas, devem ter se dissolvido com o calor do incêndio", disse Ghilardi. 
O artigo Inferring ancestral range reconstruction based on trilobite records: a study-case on Metacryphaeus (Phacopida, Calmoniidae) (doi: https://doi.org/10.1038/s41598-018-33517-5), de Fábio Augusto Carbonaro, Max Cardoso Langer, Silvio Shigueo Nihei, Gabriel de Souza Ferreira e Renato Pirani Ghilardi, pode ser lido em: https://www.nature.com/articles/s41598-018-33517-5.
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quinta-feira, 10 de janeiro de 2019

Inferring ancestral range reconstruction based on trilobite records: a study-case on Metacryphaeus (Phacopida, Calmoniidae)

Scientific Reports 8, Article number: 15179 (2018) | Download Citation

Abstract

Metacryphaeus is a calmoniid trilobite genus from the Devonian Malvinokaffric Realm, exclusive to the Gondwanan regions. It includes eleven species, which are for the first time included here in a single phylogenetic analysis. The resulting hypotheses establish relations among the Metacryphaeus species with few ambiguities, also suggesting the inclusion of both Plesiomalvinella pujravii and P. boulei within the genus, as originally considered. The results of palaeobiogeographic analyses employing the Dispersal-Extinction-Cladogenesis (DEC) model reinforce the hypothesis that Bolivia and Peru form the ancestral home of Metacryphaeus. The radiation of the genus to other Gondwanan areas took place during transgressive eustatic episodes during the Lochkovian–Pragian. The Lochkovian dispersal occurred from Bolivia and Peru to Brazil (Paraná and Parnaíba basins) and the Falklands, and Pragian dispersal occurred towards South Africa. Dispersal events from Bolivia and Peru to the Parnaíba Basin (Brazil) were identified during the Lochkovian–Pragian, suggesting the presence of marine connections between those areas earlier than previously thought.

Introduction

The Malvinokaffric Realm includes a plethora of trilobites, including the Calmoniidae, which is composed of several genera (e.g., Calmonia Clarke, 1913, Typhloniscus Salter, 1856, Plesioconvexa Lieberman, 1993, Punillaspis Baldis & Longobucco, 1977, Eldredgeia Lieberman, 1993, Clarkeaspis Lieberman, 1993, Malvinocooperella Lieberman, 1993, Wolfartaspis Cooper, 1982, Metacryphaeus Reed, 1907) reported from the Devonian rocks of Brazil, Argentina, Bolivia, Peru, Falkland Islands, and South Africa1,2,3,4,5,6,7,8,9,10. The present work focuses on the genus Metacryphaeus, which only includes Gondwanan species, namely: M. tuberculatus (Kozłowski, 1923), M. kegeli Carvalho et al., 1997, M. meloi Carvalho et al., 1997, M. parana (Kozłowski, 1923), M. giganteus (Ulrich, 1892), M. convexus (Ulrich, 1892), M. curvigena Lieberman, 1993, M. branisai Lieberman, 1993, M. caffer (Salter, 1856), M. australis (Clarke, 1913), and M. allardyceae (Clarke, 1913).

During the 1990s, Lieberman5 presented the first phylogenetic analysis of the group including Metacryphaeus, represented by M. parana, M. convexus, M. curvigena, M. branisai, M. giganteus, and M. tuberculatus, among other calmoniids (Fig. 1a). Later, Carvalho et al.6 (Fig. 1b) conducted a phylogenetic study of that genus, represented by M. parana, M. australis, M. caffer, M. allardyceae, M. tuberculatus, and M. meloi. More recently, Abe & Lieberman9 presented a palaeobiogeographical area-taxon cladogram including all Metacryphaeus species, based on the tree provided by Lieberman5, with the manual insertion of additional species (i.e., without carrying out a new phylogenetic analysis). Those phylogenetic studies did not include all the species of Metacryphaeus. Accordingly, this study provides a new phylogenetic analysis including all species, in order to perform a new palaeobiogeographic analysis for the distribution of the genus.
Figure 1
Figure 1
Previous phylogenetic models including Metacryphaeus: (a) Lieberman5; and (b) Carvalho et al.6.
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The genus Metacryphaeus occurs in many Gondwanan geological units of Devonian age, including those in Brazil, Bolivia, Falkland Islands, Peru, and South Africa, spanning the Pragian to the Givetian–Frasnian3,4,5,6,11,12 (Figs 2 and 3). It has been suggested that the genus originated and diversified in small basins of the Malvinokaffric Realm in Bolivia and Peru9. The records in this area are from the Pragian to the Givetian, including M. giganteus, M. tuberculatus, M. parana, M. convexus, M. curvigena, and M. branisai.
Figure 2
Figure 2
Palaeobiogeographic distribution of the genus Metacryphaeus during the Early and Middle Devonian. Areas were divided into (A–E) for the palaeobiogeographic analysis. Note: Plesiomalvinella boulei and P. pujravii have been reassigned here to Metacryphaeus.
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Figure 3
Figure 3
Chronostratigraphic distribution of Metacryphaeus. Note: Plesiomalvinella boulei and P. pujravii have been reassigned here to Metacryphaeus. Abbreviations: Loch., Lochkovian; Prag., Pragian; Emsi., Emsian; Eife., Efelian; Give., Givetian; Fras., Frasnian; Fame., Famennian.
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Results and Discussion

Phylogeny

The parsimony analysis resulted in two MPTs of 132 steps (consistency index = 0.41 and retention index = 0,52; Fig. 4). The only topological difference between these two trees is the placement of Metacryphaeus branisai. The strict consensus is presented in Fig. 5, along with bootstrap probabilities and Bremer decay indices for each node.
Figure 4
Figure 4
(a,b) Two most parsimonious trees (132 long and consistency index of 0.41) calculated in the present phylogenetic analysis.
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Figure 5
Figure 5
Strict consensus of the two MPTs with bootstrap values (using 1000 replicates; below) and Bremer support (above) indicated for each node.
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Plesiomalvinella boulei and P. pujravii were found deeply nested within a clade of Metacryphaeus species. Accordingly, those two species are here referred to that genus, as previously proposed by Wolfart13. Metacryphaeus (including M. boulei and M. pujravii) is here supported by two synapomorphies: frontal lobe projecting beyond the cephalic anterior border in dorsal view (character 4) and uniformly divergent axial furrows from SO to the cephalic margin (character 19).

In contrast to Lieberman5, Clarkeaspis gouldi (Lieberman, 1993) and C. padillaensis (Lieberman, 1993) were grouped into a clade supported by four synapomorphies (Figs 4 and 5): cephalic anterior border (cranidial) extended and pointed (characters 2 and 3); pentagonal glabella (character 6); 60 to 70% ratio between the basal glabellar width and the glabellar length (character 9). Clarkeaspis is here placed closer to Metacryphaeus (as its sister group) than in Lieberman5. The Metacryphaeus + Clarkeaspis clade is supported by a single synapomorphy (character 9, 0 → 1) and shows low bootstrap support (Fig. 5). The placement of Malvinocooperella pregiganteus (Lieberman, 1993) and Wolfartaspis cornutus (Wolfart 1968) as successive outgroups of the Metacryphaeus + Clarkeaspis (Figs 4 and 5), also differs from the arrangement seen in Lieberman5.

The present analysis recovered the clades formed by Metacryphaeus giganteus + M. parana (Figs 4 and 5) and M. boulei + M. pujravii (Figs 4 and 5), previously recognized by Lieberman5. Synapomorphies of the M. giganteus + M. parana clade are: 60 to 70% ratio between the basal glabellar width and the glabellar length (character 9), convergently acquired in Clarkeaspis; slender genal spine (character 36); dorsoventral height of the pygidium gradually decreasing posteriorly (character 39); 0.65 to 0.80 ratio between the maximum pygidial axial width and the maximum pygidial axial length (character 42). The M. boulei + M. pujravii clade is supported by six synapomorphies which are related to the presence of two symmetrical rows of sagittal spines on the posterior part of the glabella (character 15), the presence of one or two spines on L1 and L2 (characters 17 and 18), 0.15 and 0.25 ratio between the distance of posterior margin of the eyes to the axial furrow and the maximum glabellar width (character 25), the presence of four or five spines on the thoracic axial rings (character 37), and the prosopon covered by spines (character 48).
Our study also recovered new hypotheses for the relationships of Metacryphaeus, including a clade formed by M. allardyceae, M. caffer, M. australis, M. meloi, M. kegeli, and M. tuberculatus. This is supported by four synapomorphies related to the shape and extension of the (cranidial) cephalic anterior border (characters 2 and 3), the ratio between the sagittal length of L1 and the glabellar sagittal length (character 14), and the incision of the occipital furrow medially (character 29). The clade including M. caffer, M. australis, M. meloi, M. kegeli, and M. tuberculatus is supported by four synapomorphies (Fig. 4a): glabella posteriorly elevated and declined anteriorly to S3 (character 8); 65 to 75° α angle (character 22); rounded pygidial terminus (character 45); no spine on the pygidial terminus (character 46). Also, the clade formed by M. tuberculatus, M. meloi, and M. kegeli is supported by four synapomorphies related to L2 and L3 that do not merge distally (character 13), 55 to 64° β angles (character 23), the connection of S2 and the axial furrow (character 24), and the lack of connection between the anterior margin of the eyes and the axial furrow (character 26) (Fig. 5). Two synapomorphies support the M. caffer plus M. australis clade: characters 9 (reverted to the plesiomorphic condition) and 41, which are respectively related to a ratio greater than 80% between the basal glabellar width and the glabellar length, and to 0.25 to 0.35 ratios between the maximum pygidial axial width and the maximum pygidial width.

The clade that includes all Metacryphaeus except for M. convexus, M. curvigena, and M. branisai (Fig. 4a) is supported by three synapomorphies related to a 0.15 to 0.25 ratio between the distance from the posterior margin of the eyes to the axial furrow and the maximum glabellar width (character 25), occipital furrow weakly incised medially (character 29), and 130 to 160° γ angle (character 34). Three synapomorphies support the group formed by M. giganteus, M. parana, M. allardyceae, M. australis, M. caffer, M. meloi, M. kegeli, and M. tuberculatus (Fig. 4a): 0.25 to 0.34 ratio between sagittal length of L1 glabellar lobe and glabellar sagittal length (character 14), 0.3 to 0.4 ratio between the maximum exsagittal eyes length and the glabellar sagittal length (character 27), 0.60 to 0.80 ratio between maximal sagittal pygidial length and maximal transverse pygidial width (character 40). The position of Metacryphaeus branisai is variable in the two MPTs (Fig. 4), probably because its pygidium is unknown, implying the non-codification for characters 38 to 47.
In the phylogeny modelled by Lieberman5, Metacryphaeus convexus and M. curvigena are not considered sister taxa to all other Metacryphaeus. Instead, M. curvigena is considered the sister taxon to M. branisai and M. convexus the sister taxon to both (Fig. 1a). In our analysis, the clade formed by M. convexus and M. curvigena is supported by five synapomorphies: inclination of 10–20° of S3 in relation to SO (character 12); L2 and L3 not merged distally (character 13); cephalic axial furrows deep and broad (characters 20 and 21); evident connection between S2 and the axial furrow. Likewise, the affinities of M. meloi and M. kegeli are supported by four synapomorphies. This is interesting because these species are endemic to the Parnaíba Basin (Brazil), as is their sister-taxon M. tuberculatus, the only other species of the genus known to that basin.

Palaeobiogeography

Likelihood Ratio Test supports DEC M2 (w and j set as free parameters) as the best-fit model to our data (Table 1). The palaeobiogeographic reconstructions differ only slightly for the two MPTs, so we focus the discussion on the first MPT. The summary of biogeographic stochastic mapping (BSM) counts (Table 2) shows a predominance of dispersals among range change events (33.6% of total events) and, among those, founder events (19.6%) are slightly more frequent than anagenetic dispersals (14.1%). Vicariance was very uncommon according to our model, accounting only for 3.9% of the events (Table 2). Most dispersals occurred from Bolivia and Peru (A) to other areas, more frequently to the Paraná (B) and Parnaíba (E) basins (Table 3).
Table 1 Pairwise comparison of the results of the ancestral area reconstructions of nested DEC models on tree 1.
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Table 2 Summary of BSM (Biogeographic Stochastic Mapping) counts based on DEC M2 model showing the mean, standard deviations (SD), and percentage of different types of biogeographic events.
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Table 3 Counts (and standard deviations in parentheses) of dispersal events averaged across 100 biogeographics stochastic mappings based on the biogeographic history of Metacrypheus according to DEC M2 model.
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All three models estimate a 100% probability for Bolivia and Peru (A) as the ancestral area for the Metacryphaeus clade, as well as for most of its internal clades (Fig. 6; Supplementary Supple 3). The earliest Metacryphaeus records in this area are from the early Pragian4,5, but three range changes were estimated to have occurred earlier, during the late Lochkovian (Fig. 6): 1- the ancestor of M. parana and M. giganteus expanded its occurrence to encompass the Paraná Basin (B), with the former species maintaining this broader distribution and the latter restricted to B (subset sympatry) - in an alternative scenario, the ancestor of this clade is present only in Bolivia and Peru (A), with M. parana expanding its range to also the Paraná Basin (B); 2- M. allardyceae dispersed to the Falklands area (D); 3- the ancestor of M. australis and M. caffer dispersed to the Paraná Basin (B). During the early Pragian, M. caffer dispersed from the Paraná Basin to South Africa (C). It is interesting to note that those dispersal and expansion events likely occurred before the transgressive events on western Gondwana14,15,16,17 dated between the late Pragian and the early Emsian (Fig. 6). Those areas (A, B, C, D) were eventually connected by transgressive-regressive cycles (Fig. 6), which promoted the faunal similarity observed among the Malvinokaffric fauna of the Early Devonian15,18.
Figure 6
Figure 6
Ancestral area reconstructions based on DEC M2 model on the tree 1 (top), sea-level changes curves from Lochkovian to Frasnian (middle) based on Haq & Schutter55, and Lower Devonian palaeomap of Southern Gondwana (bottom) modified from Torsvik & Cocks56. Arrows on the palaeomap indicate inferred Lochkovian (full arrow) and Pragian (dashed arrow) dispersal routes for Metacryphaeus taxa. Additional abbreviations: DML, Dronning Maud Land, Antarctica; EWM, Ellsworth-Whitmore Mountains, Antarctica; MT, Mexican terranes; P, Precordillera Terrane, Argentina; Pat., Patagonia.
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The last common ancestor of Metacryphaeus meloi, M. kegeli, and M. tuberculatus, and the node including only the latter two taxa were reconstructed with two almost equal probable ranges, either restricted to Bolivia and Peru (A) or a joint distribution (Fig. 6) also including the Parnaíba and Paraná basins (ABE). These different ancestral range reconstructions imply distinct processes of range changes, respectively: 1 - successive dispersals from Bolivia and Peru to the other areas (for an ancestral with distribution restricted to A), 2 - distribution expansions inferred as founder events (for an ancestral widely distributed in ABE). Nevertheless, in all cases M. meloi and M. kegeli became restricted to the Parnaíba Basin (E), whereas M. tuberculatus maintained (or reached) a widespread distribution (ABE), even though its earliest records, dated as late Eifelian and early Givetian, do not include the Parnaíba Basin4,5,6,11,12. Alternatively, but with lower statistical support, the ancestral range reconstruction hypothesized for the clades M. meloi + (M. tuberculatus + M. kegeli) and M. tuberculatus + M. kegeli could be AB, encompassing only their older records. This would imply expansion events towards the Parnaíba Basin (E) after the arrival of ancestors in the Paraná Basin (B).

The arrival of Metacryphaeus in the Parnaíba Basin may have occurred via two alternative routes (Fig. 6). A northern route (surrounding the northern margin of the South American continent) would impose no continental (landmass) barriers, but there would be climatic barriers related to the warmer waters the animals would need to overcome, as the Malvinokaffric Realm marks cooler areas. Also, faunas of this age on the northern margin of South-America belong to other realms, which lack Metacryphaeus. On the other hand, a route through the Amazon Basin (Fig. 6) would have presented no climatic or faunal barriers (cf.15,18,19). Even a continental barrier might not have been in place, as there were transgression events possibly connecting that basin to Bolivia and Peru. The lack of fossils of this age in the Amazon Basin, which could confirm such a dispersal route, is related to the depositional gap present in the upper Lochkovian and lower Emsian of the basin (cf.20,21,22,23,24,25). This absence of Lochkovian–lower Emsian rocks is also observed in the Parnaíba Basin20,21,24, which hinders palaeobiogeographical inferences related to the presence/absence of Metacryphaeus in the Lower Devonian of this basin.

Other trilobite genera also have a broad Gondwanan distribution during the Devonian, e.g. the calmoniid Eldredgeia, with occurrences in the Bolivia, Brazil (Amazon and Parnaíba basins), and South Africa, and the homalonotid Burmeisteria, with records in the Brazil (Amazon, Parnaíba, and Paraná basins), Falkland Islands, South Africa, and Ghana1,15,19,26. Furthermore, the distribution of the brachiopods Tropidoleptus carinatus (Conrad, 1839) and Australocoelia palmata (Mooris & Sharpe, 1846), and the crinoids Exaesiodiscus Moore & Jeffords, 1968, Laudonomphalus Moore & Jeffords, 1968, Monstrocrinus Schmidt, 1941, and Marettocrinus Le Menn15,27,28,29,30,31,32,33,34, also reinforce that connections between the Bolivian-Peruvian region and the Amazon, Parnaíba, and Paraná basins were recurrent by the Middle Devonian (e.g.15,26). However, the dispersal and range expansion events highlighted in our biogeographic analyses (except that related to M. caffer dispersal from the Paraná Basin to South Africa) occurred during the late Lochkovian (Fig. 6). As such, our data suggest an earlier connection between all those Gondwanan regions, allowing Metacryphaeus trilobites to expand into the Paraná and Parnaíba basins via southeastern and northern/northeastern routes, respectively (Fig. 6). Another interesting fact is the diversification of Metacryphaeus in South America occurring earlier than its dispersal to South Africa (where it is represented by M. caffer). This was temporally the latest dispersal of the genus, taking place during the Pragian, and a separate event from the dispersal of M. allardyceae in the same direction (to the Falkland Islands), which occurred earlier.

Methods

Phylogenetic analysis

The phylogenetic analysis conducted here was based on the phylogeny of Lieberman5, with extra characters and species added to the data matrix. The added species were Metacryphaeus australis, M. caffer, M. kegeli, M. meloi, and M. allardyceae, as to encompass all valid species of the genus. Other ingroup taxa were defined according to the phylogenetic hypothesis of Lieberman5 consisting of Plesiomalvinella boulei, P. pujravii, Wolfartaspis cornutus, Malvinocooperella pregiganteus, Clarkeaspis gouldi, and C. padillaensis. Also, according to Lieberman5, Kozlowskiaspis (K.) superna Braniša & Vaněk, 1973 was used to root of the phylogenetic trees.

Among the 48 characters employed here (see Appendix 1), 33 were taken or modified from Lieberman5 and 15 are new (characters 7, 9, 12, 13, 14, 22, 23, 24, 25, 26, 27, 34, 40, 41, and 42), although based on characters used in phylogenetic analyses of other trilobite groups (e.g.35,36,37,38,39,40,41,42). The morphological elements of the exoskeleton are shown in Fig. 7 and all morphological relations/angles used in the 15 newly proposed characters were measured as indicated in Fig. 8.
Figure 7
Figure 7
Schematic drawing showing the major exoskeleton elements of the dorsal surface of Metacryphaeus.
Full size image
Figure 8
Figure 8
Measurements used: mgwwfl = maximum glabelar width without consider the frontal lobe; mfll = maximum frontal lobe length; mcl = maximum cephalic length; dpmeaf = distance of posterior margin of the eyes to the axial furrow; mele = maximum exsagittal length of the eyes; bgtw = basal glabellar transverse width; gsl = glabellar sagittal length; gslwfl = glabellar sagittal length without consider the frontal lobe; L1sl = sagittal length of L1 glabellar lobe; mtpaw = maximum transverse pygidial axis width; mtpw = transverse maximum pygidial width; mspl = sagittal maximum pygidial length; mpal = maximum pygidial axis length; α = angle between the axial furrow and the furrow of cephalic posterior border; β = angle between the cephalic posterior border furrow and a line traced from the posterior margin of the axial furrow to the anterior margin of the eyes; γ = angle between a straight line traced adjacent to the lateral genae (from the contact with the cephalic posterior furrow) and a line traced from the anterior part of the genae (from the contact of the axial furrow) in direction to the medial-posterior part of the genae; Ω = S3 inclination in relation to SO.
Full size image
Among the characters taken from Lieberman5, some scores were changed for some taxa based on our own interpretations. This is the case for characters 5 (changed from 0 to 1 in Malvinocooperella pregiganteus, Metacryphaeus giganteus, and Me. branisai), 18 (changed from 0 to 1 in Me. branisai), and 19 (changed from 0 to 1 in Me. giganteus). Other characters from Lieberman5, e.g. characters 9, 10, 12, 13, 19, 23, 24, and 34, were not used here because they either have too much variation between individuals of the same species or can be easily affected by taphonomic deformation. Some characters from Lieberman5 were split into two or more characters, as in case of characters 2 and 3 (=character 1 of Lieberman5), 20 and 21 (=character 18 of Lieberman5), 30 and 31 (=character 25 of Lieberman5), 35 and 36 (=character 29 of Lieberman5), and 45, 46, and 47 (=character 36 of Lieberman5), following a contingential approach43.

Characters 1 to 36 are related to the cephalon, character 37 to the thorax, 38 to 47 to the pygidium, and 48 to the prosopon (Appendix 1 and 2). All characters are related to the dorsal surface of the exoskeleton and were treated as ordered. The data matrix was analyzed in search of the Most Parsimonious Trees (MPTs) using the software TNT version 1.144. A heuristic search was conducted with 1,000 replicates, random addition of taxa (random seed 0), Tree Bisection and Reconnection (TBR) as branch swapping algorithm, and “hold” of 10 trees per replica. The recovered MPTs were summarized in a strict consensus tree. Bremer45 decay indices and bootstrap proportions46 were calculated using scripts incorporated in TNT. The data matrix was compiled in NEXUS format using the software Mesquite version 3.03 (702) and the tree images were generated with the software FigTree version 1.4.2.

Palaeobiogeographical analysis

We conducted palaeobiogeographic analyses to explore the distribution dynamic and biogeographical events that affected Metacryphaeus distribution through time in five areas pre-defined based on the known occurrences genus: Bolivia and Peru (A); Paraná Basin, Brazil (B); South Africa (C); Falkland Islands (D); and Parnaíba Basin, Brazil (E). Bolivia and Peru were treated as a single area due to their geographical proximity, strong palaeontological association, and co-occurrence of endemic species2,47. Only fossil taxa with accurate occurrence data and taxonomic identification were included. For this reason, taxa with doubtful assignation (cf., aff.) were not considered in our analyses (e.g.48).

Ancestral area reconstructions were conducted using R (R Development Core Team 2013) package BioGeoBEARS49, which allows comparing the likelihood of our data given distinct models, choosing that with better fit50. We tested three nested models based on the LAGRANGE Dispersal-Extinction-Cladogenesis (DEC) model51,52: M0 contains the default parameters of the DEC models49; M1 has the addition of the free parameter w; and M2 has the addition of the free parameters w and j. The free parameter w is a multiplier of the dispersal matrices and when set to 1 (e.g. in M0) the probabilities of dispersal events are based solely on the dispersal matrices and equal across all events53. The founder-event parameter j (included only in M2 and set to 0 in M0 and M1) allows range changes to areas distinct to that of the ancestor during a cladogenetic event49. We employed the Likelihood Ratio Test (LRT) to select the best model.

We used time-calibrated versions of the two MPTs, dividing them into two time slices, Silurian to Lower Devonian (430–395 Ma) and Middle to Upper Devonian (395–382 Ma). Based on that, we conducted a time-stratified analyses using time-specific dispersal multiplier and area matrices (see Supplementary supple 2 and supple 3). This allowed changing the distances and probabilities between the areas along these periods, simulating the continental transformations.
We also conducted a biogeographic stochastic mapping (BSM) on BioGeoBEARS54 to estimate the number and type of biogeographical events. We conducted the BSM only for the first MPT, as the ancestral area reconstruction of both MPTs differ only slightly, and employed the parameters of the best-fit model of the ancestral area reconstruction53. The mean and standard deviation of event counts of 100 BSMs were used to estimate the frequencies of range change between the considered areas and of each kind of biogeographic event.

Conclusions

This work provides new phylogenetic hypotheses for the relationships of all species within the genus Metacryphaeus, including the identification of the clades composed of (1) M. caffer and M. australis, (2) M. tuberculatus, M. meloi, and M. kegeli, (3) M. tuberculatus and M. kegeli, (4) M. curvigena and M. convexus, the latter two as sites clades. The position of M. branisai varied in the two recovered MPTs, probably due to the unknown pygidium for this specie. As Plesiomalvinella pujravii and P. boulei were positioned within the Metacryphaeus clade, these species were reinserted in that genus, as originally suggested by Wolfart13. Finally, the genus Clarkeaspis represents the immediate outgroup to Metacryphaeus.

The results of the palaeobiogeographic analyses with DEC models reinforce the interpretations of Lieberman5 and Abe & Lieberman9 that Metacryphaeus originated in the Lower Devonian of Bolivia and Peru, where they are represented by a higher taxonomic diversity. The radiation of Metacryphaeus to other Gondwanan regions probably occurred during the transgressive events in the Lochkovian–Pragian. In the Lochkovian, dispersals would have occurred to the Paraná Basin, in Brazil (M. parana, M. australis, M. tuberculatus), as well as to the Falklands area (M. allardyceae) and the Parnaíba Basin (M. meloi, M. kegeli, M. tuberculatus). Pragian dispersal events were reconstructed only towards South Africa (M. caffer).

The ancestral area reconstructions for Metacryphaeus show dispersal events occurring earlier than expected, i.e. during the Early Devonian, even though the faunal similarities of Bolivia and Peru with the Parnaíba and Amazon basins are more prominent in the Middle Devonian, with the sharing of brachiopod (Tropidoleptus and Australocoelia), crinoid (Exaesiodiscus, Laudonomphalus, Monstrocrinus, and Marettocrinus), and other trilobite (Eldredgeia and Burmeisteria) taxa. The results presented here indicate that these areas were also somehow connected during the beginning of the Devonian, as to allow the dispersal of Metacryphaeus.

Data Availability

The datasets analyzed during the current study are available in: https://figshare.com/s/6b42cf2d4d0cadde7e11.

Additional information

Publisher's note: Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

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    • Acknowledgements

    We would like to thank Fundação de Amparo à Pesquisa do Estado de São Paulo [FAPESP 2013/09683-3 (F.A.C.), 2014/03825-3 (M.C.L.), 2016/18275-4 (R.P.G.), 2015/10788-0 (S.S.N.), 2014/25379-5 (G.S.F.), 2016/03934-2 (G.S.F.)] for their financial support. S. S. Nihei thanks the financial support from CNPq (403165/2016-4, 303615/2015-2). We would like to thank Nicholas J. Matzke for the help with BioGeoBEARS.

    Author information

    Affiliations

    1. Departamento de Ciências Biológicas, Faculdade de Ciências de Bauru, Universidade Estadual Paulista Júlio de Mesquita Filho – UNESP, Av. Eng. Luiz Edmundo Carrijo Coube, 14-01, CEP 17033-360, Bauru/SP, Brazil

      • Fábio Augusto Carbonaro
      •  & Renato Pirani Ghilardi

    2. Laboratório de Paleontologia, Faculdade de Filosofia, Ciências e Letras de Ribeirão Preto, Universidade de São Paulo – USP, Av. Bandeirantes, 3900, CEP 14040-901, Ribeirão Preto/SP, Brazil

      • Max Cardoso Langer
      •  & Gabriel de Souza Ferreira

    3. Departamento de Zoologia, Instituto de Biociências, Universidade de São Paulo – USP, Rua do Matão, Travessa 14, 101, Butantã, CEP 05508-090, São Paulo/SP, Brazil

      • Silvio Shigueo Nihei

    4. Fachbereich Geowissenschaften der Eberhard Karls Universität Tübingen, Hölderlinstraße 12, 72074, Tübingen, Germany

      • Gabriel de Souza Ferreira

    Contributions

    F.A.C. wrote the main manuscript text, prepared figures, conducted the phylogeny and paleobiogeography analyses. G.S.F. conducted the BioGeoBEARS analysis, wrote part of the Methods and Results (related to Palaeobiogeography), helped in the Figure 6 and in the palaeobiogeographical interpretation. S.S.N. helped in palaeobiogeography (methods and interpretation). M.C.L. and R.P.G. helped in taxonomy, phylogeny, and palaeobiogeography interpretations. All authors reviewed the manuscript.

    Competing Interests

    The authors declare no competing interests.

    Corresponding author

    Correspondence to Fábio Augusto Carbonaro.

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